Relative time
The CA is controlled by the following buttons:
Start: CA are planted.
Hide CA-1 Hide CA-2
Out CA-1+: raise output rate Out CA-1-: reduce
output rate Out CA-2+: raise output rate Out CA-2-:
reduce output rate
Infection: Infect CA-1
Information:
Input rates Output rates, Resources, Size, Illness indicator.
Click on Start. Two zygotes are planted. While CA-2 proceeds
from state to state as before, CA-1 remains in each state somewhat
longer. Actually its transit time through a state is
proportional to its size The smaller the CA-1 the faster
it proceeds from state to state.
Hide CA-2 and click on Start. As CA-1 matures it
stays in each state longer. After a while click several times
on infection until both CA part.. CA-1 gets smaller,
proceeds faster from state to state and travels faster. Since
its resources are low it needs to run into CA-2
and boost them up. When cooperating the CA accumulate resources
and are healthy, and when parting they are ill.
Hide CA-2; Set Out-CA-2 = 0 ; Set Out-CA-1 = 1.5.
As output rises CA-1 gets smaller, it proceeds faster from state
to state and travels faster. Rescue it from its illness by reducing
CA-1 output rate to 0.5. Let the CA cooperate and be healthy.
Biological time
Each CA observes a different time. CA-2 stands for the chronological
time whose intervals are constant. The state transit
time of CA-1 depends on its size and varies. It is called biological
time. . Since processes in the body are asynchronous they
have to adjust their clocks for interacting.
Take a seemingly simple biochemical reaction: A + B = C. In order
to produce C, two proteins A and B have to interact. Yet A and
B are states of two processes whose origins are
at the gene site from where they stream toward
the interaction site. Both are asynchronous, and in order to
interact they have to adjust their clocks, like
in the previous experiment . Each process
has its own clock and time. Time in the organism is even more
relative than in Relativity theory. It is bounded chaotic.
Additional reading:
Streaming proteins
Protein synthesis
Circadian
rhythms
Since our life is controlled by the day and night cycle, it appears
as if the processes are synchronized. Chrono-biologists spread
the illusion as if processes in the body are synchronized by
the sun and operate like a linear computer. In reality the sun
only modulates this asynchronicity.
Additional reading:
The illusion of time